AT1G16160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : wall associated kinase-like 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
WAK-like kinase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
wall associated kinase-like 5 (WAKL5); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 1 (TAIR:AT1G16120.1); Has 123134 Blast hits to 120241 proteins in 4306 species: Archae - 131; Bacteria - 13824; Metazoa - 45906; Fungi - 10588; Plants - 34048; Viruses - 501; Other Eukaryotes - 18136 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:5535973..5538269 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78448.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.90 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 711 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNGSSAATPP PPPNSKNSST SCNRTCGGIS IPFPFGIGGK DCYLNGWYEV VCNATTSGSS GTTVPFLSRI NREVVNISLP EGNNEQYGVV HIKGPVTSLG 101: CSSNTSQVPQ KSLPDLNVTG KGSPYFITDE NRLVAVGCGT KALMTDIESE ILGCESSCKD SKSSQEVTNL LCDGYKCCQA RIPVERPQAV GVNIESSGGD 201: GCKVAFLSSK RYSPSNVTIP EQFHAGGYVV VELGWYFATT DSRFRNPLGC INLTYSGSYL SGDSCLCEYG YFSEMSYRNC YCSLGFTGNP YLRGGCIDND 301: DCKGPNICEE GTCVNVPGGY RCDPKPKIIK PAKPLVLQGV LLGLMGLLFL VVGTLGLIIF IKKRRRIISS RKFFKRNGGL LLKQQLTTTN DGNVDMSRLF 401: SSEELKKATD NFSVKRVLGK GSQGTVYKGM MVDGKIIAVK RSKVVDEDKL EKFINEIILL SQINHRNIVK LIGCCLETEV PILVYEYIPN GDMFKRLHDE 501: SDDYAMTWEV RLRIAIEIAG ALTYMHSAAS FPIYHRDIKT TNILLDEKYG AKVSDFGTSR SVTIDQTHLT TMVAGTFGYM DPEYFLSSQY TDKSDVYSFG 601: VVLVELITGE KPLSRIRSEE GRGLATHFLE AMKENRVIDI IDIRIKEESK LDQLMAVAKL ARKCLSRKGI KRPNMREASL ELERIRSSPE DLEAHIENDD 701: EEDQVMEISR E |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)