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AT1G16030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31023727 (2019): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28003327 (2017): extracellular region apoplast
  • PMID:27943495 (2017): mitochondrion
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22550958 (2012): plastid
  • PMID:22215637 (2012): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : heat shock protein 70B
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2249-MONOMERBioGrid:23414eggNOG:COG0443eggNOG:KOG0101
EMBL:AC010924EMBL:BT001988EMBL:BT008401EMBL:CP002684
EnsemblPlants:AT1G16030EnsemblPlants:AT1G16030.1entrez:838174Gene3D:1.20.1270.10
Gene3D:2.60.34.10GeneID:838174Genevisible:Q9S9N1GO:GO:0005524
GO:GO:0005618GO:GO:0005886GO:GO:0009408GO:GO:0009507
GO:GO:0009615GO:GO:0016020Gramene:AT1G16030.1hmmpanther:PTHR19375
hmmpanther:PTHR19375:SF229HOGENOM:HOG000228135InParanoid:Q9S9N1IntAct:Q9S9N1
InterPro:IPR013126InterPro:IPR018181InterPro:IPR029047InterPro:IPR029048
KEGG:ath:AT1G16030KO:K03283ncoils:CoilOMA:GGMPTDG
PaxDb:Q9S9N1Pfam:PF00012Pfam:Q9S9N1PhylomeDB:Q9S9N1
PIR:B86295PRIDE:Q9S9N1PRINTS:PR00301PRO:PR:Q9S9N1
PROSITE:PS00297PROSITE:PS00329PROSITE:PS01036ProteinModelPortal:Q9S9N1
Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-3371568Reactome:R-ATH-3371571
Reactome:R-ATH-72163RefSeq:NP_173055.1scanprosite:PS00297scanprosite:PS00329
scanprosite:PS01036SMR:Q9S9N1STRING:3702.AT1G16030.1SUPFAM:SSF100920
SUPFAM:SSF100934SUPFAM:SSF53067TAIR:AT1G16030tair10-symbols:Hsp70b
UniGene:At.41906UniProt:Q9S9N1
Coordinates (TAIR10) chr1:-:5502386..5504326
Molecular Weight (calculated) 70918.50 Da
IEP (calculated) 5.06
GRAVY (calculated) -0.38
Length 646 amino acids
Sequence (TAIR10)
(BLAST)
001: MATKSEKAIG IDLGTTYSCV GVWMNDRVEI IPNDQGNRTT PSYVAFTDTE RLIGDAAKNQ VALNPQNTVF DAKRLIGRKF SDPSVQSDIL HWPFKVVSGP
101: GEKPMIVVSY KNEEKQFSPE EISSMVLVKM KEVAEAFLGR TVKNAVVTVP AYFNDSQRQA TKDAGAISGL NVLRIINEPT AAAIAYGLDK KGTKAGEKNV
201: LIFDLGGGTF DVSLLTIEEG VFEVKATAGD THLGGEDFDN RLVNHFVAEF RRKHKKDIAG NARALRRLRT ACERAKRTLS STAQTTIEID SLHEGIDFYA
301: TISRARFEEM NMDLFRKCMD PVEKVLKDAK LDKSSVHDVV LVGGSTRIPK IQQLLQDFFN GKELCKSINP DEAVAYGAAV QAAILTGEGS EKVQDLLLLD
401: VAPLSLGLET AGGVMTVLIP RNTTVPCKKE QVFSTYADNQ PGVLIQVYEG ERARTRDNNL LGTFELKGIP PAPRGVPQIN VCFDIDANGI LNVSAEDKTA
501: GVKNQITITN DKGRLSKEEI EKMVQDAEKY KAEDEQVKKK VEAKNSLENY AYNMRNTIKD EKLAQKLTQE DKQKIEKAID ETIEWIEGNQ LAEVDEFEYK
601: LKELEGICNP IISKMYQGGA AAGGMPTDGD FSSSGAAGGP KIEEVD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)