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AT1G15880.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
ASURE: golgi
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : golgi snare 11
Curator
Summary (TAIR10)
Golgi SNARE 11 protein (GOS11)
Computational
Description (TAIR10)
golgi snare 11 (GOS11); BEST Arabidopsis thaliana protein match is: golgi snare 12 (TAIR:AT2G45200.1); Has 412 Blast hits to 412 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 123; Plants - 99; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Protein Annotations
BioGrid:23398eggNOG:ENOG410YI1XeggNOG:KOG3208EMBL:AC034256
EMBL:AF332426EMBL:AF357528EMBL:AF410263EMBL:AY093723
EMBL:CP002684EnsemblPlants:AT1G15880EnsemblPlants:AT1G15880.1entrez:838158
GeneID:838158Genevisible:Q9LMP7GO:GO:0000139GO:GO:0005484
GO:GO:0005794GO:GO:0005797GO:GO:0005801GO:GO:0006888
GO:GO:0006906GO:GO:0015031GO:GO:0016021GO:GO:0031201
GO:GO:0048209Gramene:AT1G15880.1hmmpanther:PTHR21094hmmpanther:PTHR21094:SF1
HOGENOM:HOG000207760InParanoid:Q9LMP7IntAct:Q9LMP7InterPro:IPR023601
iPTMnet:Q9LMP7KEGG:ath:AT1G15880KO:K08495OMA:QMTEYIA
PANTHER:PTHR21094PaxDb:Q9LMP7Pfam:PF12352Pfam:Q9LMP7
PhylomeDB:Q9LMP7PIR:C86293PIRSF:PIRSF027109PRIDE:Q9LMP7
PRO:PR:Q9LMP7ProteinModelPortal:Q9LMP7Proteomes:UP000006548Reactome:R-ATH-6807878
RefSeq:NP_563985.1STRING:3702.AT1G15880.1TAIR:AT1G15880tair10-symbols:atgos11
tair10-symbols:GOS11TMHMM:TMhelixUniGene:At.15574UniProt:Q9LMP7
Coordinates (TAIR10) chr1:-:5458718..5460089
Molecular Weight (calculated) 25215.20 Da
IEP (calculated) 8.48
GRAVY (calculated) -0.34
Length 223 amino acids
Sequence (TAIR10)
(BLAST)
001: MDVPSSWDAL RKQARKIEAQ LDEQMHSYRR LVSTKALSKS DGNESDLEAG IDLLLRQLQQ VNAQMQAWVS SGGSEMVSHT LTRHQEILQD LTQEFYRHRS
101: SLRAKQEHAS LLEDFREFDR TRLDLEDGYG SEQALIKEHM GINRNTAQMD GVISQAQATL GTLVFQRSTF GGINSKLSNV ASRLPTVNTI LAAIKRKKSM
201: DTIILSLVAA VCTFLIFIYW ITK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)