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AT1G15110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.775
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphatidyl serine synthase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 329 Blast hits to 325 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G15110-MONOMERBioCyc:ARA:GQT-2124-MONOMERBioGrid:23314EC:2.7.8.8
eggNOG:ENOG410XS7HeggNOG:KOG2735EMBL:AC007591EMBL:BX813560
EMBL:CP002684EnsemblPlants:AT1G15110EnsemblPlants:AT1G15110.1entrez:838074
ExpressionAtlas:F4HXY7GeneID:838074Genevisible:F4HXY7GO:GO:0003882
GO:GO:0005789GO:GO:0006646GO:GO:0006659GO:GO:0009556
GO:GO:0016021GO:GO:0031965gramene_pathway:2.7.8.8gramene_pathway:PHOSLIPSYN2-PWY
gramene_pathway:PWY-5669hmmpanther:PTHR15362hmmpanther:PTHR15362:SF6HOGENOM:HOG000005791
InterPro:IPR004277PaxDb:F4HXY7Pfam:F4HXY7Pfam:PF03034
PIR:G86284PRIDE:F4HXY7PRO:PR:F4HXY7Proteomes:UP000006548
Reactome:R-ATH-1483101RefSeq:NP_172963.3STRING:3702.AT1G15110.2TAIR:AT1G15110
TMHMM:TMhelixUniGene:At.41943UniPathway:UPA00558UniProt:F4HXY7
Coordinates (TAIR10) chr1:+:5199594..5201908
Molecular Weight (calculated) 49520.90 Da
IEP (calculated) 9.13
GRAVY (calculated) 0.18
Length 425 amino acids
Sequence (TAIR10)
(BLAST)
001: MEPNGYRKER RKEQHLGRMN GGGGDVETDL DPWTAWAYKP RTISLLLIGA CFLIWASGAL DPDSTTSDDL VTSVKRGVWA MIAVFLAYSL LQAPSTVLIR
101: PHPAIWRLVH GMAVIYLVAL TFLLFQRRDD ARQFMKFLHP DLGIELPEKS YGADCRIYVP DHPTNRFKNL YDTVFDEFFL AHIFGWWGKA ILIRNQPLLW
201: VLSIGFELLE VTFRHMLPNF NECWWDSIVL DILICNWFGI WAGMYTVRYF DGKTYEWVGI SRQPNIIGKV KRTLGQFTPA HWDKDEWHPL QGPWRFIQVL
301: TLCIIFLTVE LNTFFLKFSL WIPPRNPVIL YRLILWWLIA IPTTREYNSY LQDRKPVKKV GAFCWLSLGI CIVELLICIK FGSGLYPTEM PLWVVTLWGS
401: VGLGLVAFLL SWTWKIQKIL AQKRR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)