AT1G15030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF789) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a Cysteine-rich peptide (CRP) family protein | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT2G01260.1); Has 315 Blast hits to 313 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 311; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:5177895..5179853 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40493.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.81 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||
| Length | 360 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLGAGFNFTQ LQRAQIDVSY GCRSSHTKDR ENGSALLKHH VSEASSSNVE RFLDSVTPSV PAHYLSKTIV RERGGSDVES QVPYFLLGDV WESFAEWSAY 101: GIGVPLTLNN NKDRVFQYYV PSLSGIQVYA DVDALTSSLQ ARRQGEESES DFRDSSSEGS SSESERGLCY SKEQISARMD KLSLRKEHQE DSSSDDGEPL 201: SSQGRLIFEY LERDLPYVRE PFADKMSDLA SRFPELKTLR SCDLLPSSWF SVAWYPIYKI PTGPTLKDLD ACFLTYHSLH TPFQGPGVTT GSMHVVQPRE 301: SVEKMELPVF GLASYKLRGS VWTSFGGSGH QLANSLFQAA DNWLRLRQVN HPDFIFFCRR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)