AT1G14680.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09060.1); Has 8132 Blast hits to 6366 proteins in 685 species: Archae - 171; Bacteria - 671; Metazoa - 4046; Fungi - 445; Plants - 318; Viruses - 23; Other Eukaryotes - 2458 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:5040861..5041733 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34194.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.95 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.84 | ||||||||||||||||||||||||||||
| Length | 290 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDLSREVDDF IKETIDHSLG LPISMDVLQK KLYTAEESQR RLREQYLSLV SRLKEKEKVI DLVRSEASMN AQSLKKFVEE NQKLGSERED LVNQCKKWEK 101: ECFLYHQDRE SLMEFGNETD ERAREAESRV RELEEEVRKM SDEIKSRIES EEDCLVDSIL ASFVSKDESI SLGRIFLEAN SEEDKCCETL LRKWDQLKPT 201: TQKFVSLVSM VKRIEKEKEC LIMNLAKAEQ EVELVSEQNR ELDRENRKFL RQCSAERSHG SNKFNKRKSI KMMSSPIEKR IELSSQEFID |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)