AT1G14660.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Na+/H+ exchanger 8 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of putative Na+/H+ antiporter (AtNHX) family. Functions as a plasma membrane Li+/H+ antiporter. Involved in Li+ efflux and detoxification. | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Na+/H+ exchanger 8 (NHX8); CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 7/8, conserved region (InterPro:IPR018418); BEST Arabidopsis thaliana protein match is: sodium proton exchanger, putative (NHX7) (SOS1) (TAIR:AT2G01980.1). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:5032163..5036439 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 80997.50 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.08 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.26 | ||||||||||||||||||||||||||||
| Length | 733 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTSIIGAALP YKSPEKAIAS SSYSAENDSS PVDAVIFAGT SLVLGTACRY LFNGTRVPYT VVLLVIGIFL GSLEYGTKHN LGKLGHGIRI WNGINPDLLL 101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG 201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA 301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVGCCFA VARSICKTLG HMIQQSSGNS YLSSDTGTRF 401: LFLTGGIVFL TLVVNGSTTQ LLLHLLRMDT LTATKKRILE YTKFEMMKTA LKAFENLGDD EELGSADWPT VIRHISSLKD LEGRQVNPHD GYEAGSLDPT 501: NIMDIRIRFL NGVQAAYWEM LDDGRITQCT ANVLMQSVDE ALDLVSTSSL SDWRGLEPRV HFPNYYKFLQ SKIIPHKLVT HLIVERLESA CYISSAFLRA 601: HRIARQQLHI FLGNSNIAST VINESEVEGE EAKQFLEDVR DSFPQVLSVL KTRQVTHYVL NHLNGYIKNL EKVGLLEGKE VSHLHDVVQS DLKKLLRHPP 701: SLKLPNVDDL ITSNPLLKDR SSFRSLAIGE TDA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)