AT1G14185.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glucose-methanol-choline (GMC) oxidoreductase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G14190.1); Has 12030 Blast hits to 11184 proteins in 1126 species: Archae - 6; Bacteria - 4157; Metazoa - 958; Fungi - 1842; Plants - 310; Viruses - 9; Other Eukaryotes - 4748 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:4850284..4851885 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55423.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.32 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||||||
| Length | 503 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSHFVFLFII SMFINLSQGA QMPYMTTDPK EVSGKSFDYI VVGGGTAGCS LAATLSEKYS VLVIERGGSP FGDPLVEDKK YYGYSLINTD EYSSVAQSFT 101: SVDGIKNHRG RVLGGSSAIN GGFYSRASDE FVKKAGWDKD LVQESYKWVE SKVVFMPELT RWQSIVQFGF LEAGFYPYNG YSLEHTQGTK IGGSIFDQCG 201: KRHTSADLLG YGKPNCITVL LNATVKSIIF DANKTRAVGV RFMESDGNSS KSYKVHVEQH RGEVILAAGA LGSPQILLLS GIGPENHLND FDIPVIVNLK 301: EVGKQMSDNP AISLLVDRFS QNLTVDPPQV VAITEGFKFI LQSLVLPTNI TTTRTAISAK IAFPKSKGRL KLNNTNPREN PSVTFNYLEN KADLDACQEM 401: VLHLQHVARS KTVTFFLGTQ AQDKLVAGDE ELKKFCIKNV RTYYHYHGGC VVGSVVNEEY KVNGVKRLRV VDGSTFEESP GTNPMATVLM LGRYQGIKIL 501: KEH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)