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AT1G14030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23851315 (2013): plastid
  • PMID:21531424 (2011): plastid
  • PMID:21311031 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16207701 (2006): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Rubisco methyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 1278 Blast hits to 1271 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 348; Plants - 463; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G14030-MONOMEREC:2.1.1.259eggNOG:ENOG410Y7DReggNOG:KOG1337
EMBL:AC007576EMBL:AC068197EMBL:BT005791EMBL:CP002684
EnsemblPlants:AT1G14030EnsemblPlants:AT1G14030.1entrez:837964Gene3D:3.90.1420.10
GeneID:837964Genevisible:Q9XI84GO:GO:0009507GO:GO:0009570
GO:GO:0016279GO:GO:0018023GO:GO:0018026GO:GO:0030785
Gramene:AT1G14030.1hmmpanther:PTHR13271hmmpanther:PTHR13271:SF29HOGENOM:HOG000265866
InParanoid:Q9XI84InterPro:IPR001214InterPro:IPR011192InterPro:IPR015353
KEGG:ath:AT1G14030KO:K00592OMA:WEIKGAGPaxDb:Q9XI84
Pfam:PF00856Pfam:PF09273Pfam:Q9XI84Pfscan:PS50280
Pfscan:PS51583PhylomeDB:Q9XI84PIR:F86273PIRSF:PIRSF009328
PRIDE:Q9XI84PRO:PR:Q9XI84PROSITE:PS50280PROSITE:PS51583
ProteinModelPortal:Q9XI84Proteomes:UP000006548RefSeq:NP_172856.1SMR:Q9XI84
STRING:3702.AT1G14030.1SUPFAM:0040997SUPFAM:SSF81822SUPFAM:SSF82199
TAIR:AT1G14030UniGene:At.41996UniGene:At.41997UniProt:Q9XI84
Coordinates (TAIR10) chr1:-:4805493..4807440
Molecular Weight (calculated) 54614.60 Da
IEP (calculated) 4.73
GRAVY (calculated) -0.19
Length 482 amino acids
Sequence (TAIR10)
(BLAST)
001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)