AT1G13610.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.563 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; EXPRESSED IN: cotyledon, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G30380.2); Has 4490 Blast hits to 4478 proteins in 963 species: Archae - 8; Bacteria - 1669; Metazoa - 672; Fungi - 266; Plants - 333; Viruses - 11; Other Eukaryotes - 1531 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:4664008..4665975 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40406.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.54 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||
| Length | 358 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGIATSTMAA KLAFFPPNPP SYTVVTEEST GKMMISTNLP HYLRDENIEV VKIRTKRGNE IVAMYVKNPT AKLTVLFSHG NASDLAQIFY ILAELIQLNV 101: NLMGYDYSGY GQSSGKPSEQ DTYADIEAAY NWLRQTYGTK DERIILYGQS VGSGPSLELA SRLPRLRALV LHSPFLSGLR VMYPVKHSFP FDIYKNIDKI 201: HLVECPVLVI HGTDDDVVNI SHGKHLWGLC KEKYEPLWLK GRGHSDIEMS PEYLPHLRKF ISAIEKLPVP KFRRQSLAND HKNDKSTKSS WIGSRHSIEC 301: VPPRDKSRKI SIDHRFGKPR NSVGSSDRAR NSFDRLGEMV RSVRLCNVDC VKNAVAEV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)