AT1G13080.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.891 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 2 | ||||||||
| Curator Summary (TAIR10) |
cytochrome P450 monooxygenase | ||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 71, subfamily B, polypeptide 2 (CYP71B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone, heat acclimation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 20 (TAIR:AT3G26180.1); Has 32035 Blast hits to 31943 proteins in 1691 species: Archae - 47; Bacteria - 3431; Metazoa - 11477; Fungi - 6850; Plants - 9043; Viruses - 3; Other Eukaryotes - 1184 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:4459493..4460807 | ||||||||
| Molecular Weight (calculated) | 44349.60 Da | ||||||||
| IEP (calculated) | 6.44 | ||||||||
| GRAVY (calculated) | -0.33 | ||||||||
| Length | 384 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MLQPTKDGGE RKTLLRFQRH HFRTIRYIRE EEVDFVVKKV SESALKQSPV DLSKTFFSLT ASIICRVALG QNFNESGFVI DQDRIEELVT ESAEALGTFT 101: FSDFFPGGLG RFVDWLFQRH KKINKVFKEL DAFYQHVIDD HLKPEGRKNQ DIVTLILDMI DKQEDSDSFK LNMDNLKAIV MDVFLAGIDT SAVTMIWAMT 201: ELIRNPRVMK KAQESIRTTL GLKKERITEE DLGKVEYLNH ILKETFRLHP ALPFVVPRET MSHIKIQGYD IPPKTQIQLN VWTIGRDPKR WNDPEEFNPE 301: RFANSSVDFR GQHFDLLPFG SGRRICPGMP MAIASVELAL MNLLYYFDWS MPDGTKGEDI DMEEAGNISI VKKIPLQLVP VQRY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)