AT1G13060.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.979 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : 20S proteasome beta subunit E1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes 20S proteasome beta subunit PBE1 (PBE1). | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
20S proteasome beta subunit E1 (PBE1); FUNCTIONS IN: peptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: guard cell, pollen tube; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G26340.1). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:4452641..4454663 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32346.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.72 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||
| Length | 298 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKLDTSGFET SMPMIGFGSS SDMLDELSSV PSFDLPRTKE FDGFQKKAKD MLKHAKGTTT LAFIFKGGVM VAADSRASMG GYISVSSLKN SSKNMHPFDI 101: VDFGRNTTSQ SVKKIIEINP YMLGTMAGGA ADCQFWHRNL GIKCRLHELA NKRRISVSGA SKLLANMLYS YRGMGLSVGT MIAGWDETGP GLYYVDNEGG 201: RLKGDRFSVG SGSPYAYGVL DSGYKYDMSV EEASELARRS IYHATFRDGA SGGVASVYHV GPEGWTKLSG DDVGELHYHY YPVAPATAEQ VMEEATAE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)