AT1G12830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 39778 Blast hits to 22088 proteins in 1060 species: Archae - 152; Bacteria - 6161; Metazoa - 14109; Fungi - 6144; Plants - 2156; Viruses - 601; Other Eukaryotes - 10455 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:4374412..4375053 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 23615.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 3.56 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.43 | ||||||||||||||||||||||||||||
| Length | 213 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADVENQQDS SFPVKRKSDL FCQDQDNVTN KAQKLNPSLN SADSESKDGE TNGSGQIENL NSSTEETIGA ESSVLSEKAA EEVESGVIGD VGAEEEQEDE 101: EDEEEDDEEE EEEEEVVDRK GKGISREDKG KGKMIEVEES DDEDDSDDDE DDEGFDEDDE SDFSDDPLAE VDLDNILPSR TRRRSSQPGV FIPNEFSNRH 201: VNDEDDESSD SDA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)