AT1G12740.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 87, subfamily A, polypeptide 2 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a protein with cytochrome P450 domain | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 87, subfamily A, polypeptide 2 (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:4342462..4344569 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55060.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.40 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 478 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKNDVDM CRYGPIFKTN LVGRPVIVST DADLSYFVFN 101: QEGRCFQSWY PDTFTHIFGK KNVGSLHGFM YKYLKNMVLT LFGHDGLKKM LPQVEMTANK RLELWSNQDS VELKDATASM IFDLTAKKLI SHDPDKSSEN 201: LRANFVAFIQ GLISFPFDIP GTAYHKCLQG RAKAMKMLRN MLQERRENPR KNPSDFFDYV IEEIQKEGTI LTEEIALDLM FVLLFASFET TSLALTLAIK 301: FLSDDPEVLK RLTEEHETIL RNREDADSGL TWEEYKSMTY TFQFINETAR LANIVPAIFR KALRDIKFKD YTIPAGWAVM VCPPAVHLNP EMYKDPLVFN 401: PSRWEGSKVT NASKHFMAFG GGMRFCVGTD FTKLQMAAFL HSLVTKYRWE EIKGGNITRT PGLQFPNGYH VKLHKKRD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)