AT1G12350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.969 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : 4-phospho-panto-thenoylcysteine synthetase | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4’-phospho-N-pantothenoylcysteine (PPC) | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
4-phospho-panto-thenoylcysteine synthetase (COAB); FUNCTIONS IN: phosphopantothenate--cysteine ligase activity, catalytic activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: DNA / pantothenate metabolism flavoprotein (TAIR:AT5G02080.1); Has 721 Blast hits to 697 proteins in 349 species: Archae - 42; Bacteria - 251; Metazoa - 127; Fungi - 134; Plants - 66; Viruses - 4; Other Eukaryotes - 97 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:4198870..4200633 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35370.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.71 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 317 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSISGLVED EISSFFESSP PLKNKEEIVA NLNQFIELNS SCQGGMRRIV CVTSGGTTVP LEQRCVRYID NFSSGNRGAA STENFVKAGY AVIFLYRRGT 101: CQPYCRYLPD DPFLECFEFP DAKNIQVHGS HSGAVKMAVM DQQAAVAEGR LLKLPFSTIY EYLQMLRLIA TILKDVGPCS MFYLAAAVSD FYVPWLSMTE 201: HKIESGSGPL DIRLAQVPKM LSILRSNWAP KAFCISFKLE TDSKILLEKA TKALQKYKVH AVVANELLTR KEEVVVVSSS GNVVVRRDSN KPESIVEDNL 301: IRLLVDRHST YIKESLT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)