AT1G12140.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.458 plasma membrane 0.152 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : flavin-monooxygenase glucosinolate S-oxygenase 5 | ||||||||||||
| Curator Summary (TAIR10) |
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates | ||||||||||||
| Computational Description (TAIR10) |
flavin-monooxygenase glucosinolate S-oxygenase 5 (FMO GS-OX5); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 3 (TAIR:AT1G62560.1); Has 11380 Blast hits to 10828 proteins in 1431 species: Archae - 28; Bacteria - 5328; Metazoa - 1193; Fungi - 1290; Plants - 802; Viruses - 0; Other Eukaryotes - 2739 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:4121386..4123366 | ||||||||||||
| Molecular Weight (calculated) | 51936.20 Da | ||||||||||||
| IEP (calculated) | 6.13 | ||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||
| Length | 457 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAPARTRVNS LNVAVIGAGA AGLVAARELR RENHTVVVFE RDSKVGGLWV YTPNSEPDPL SLDPNRTIVH SSVYDSLRTN LPRECMGYRD FPFVPRPEDD 101: ESRDSRRYPS HREVLAYLED FAREFKLVEM VRFKTEVVLV EPEDKKWRVQ SKNSDGISKD EIFDAVVVCN GHYTEPRVAH VPDSWPGKQI HSHNYRVPDQ 201: FKDQVVVVIG NFASGADISR DITGVAKEVH IASRSNPSKT YSKLPGSNNL WLHSMIESVH EDGTIVFQNG KVVQADTIVH CTGYKYHFPF LNTNGYITVE 301: DNCVGPLYEH VFPPALAPGL SFIGLPWMTL QFFMFELQSK WVAAALSGRV TLPSEEKMME DVTAYYAKRE AFGQPKRYTH RLGGGQVDYL NWIAEQIGAP 401: PGEQWRYQEI NGGYYRLATQ SDTFRDKWDD DHLIVEAYED FLRQKLISSL PSQLLES |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)