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AT1G12140.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.982
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : flavin-monooxygenase glucosinolate S-oxygenase 5
Curator
Summary (TAIR10)
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational
Description (TAIR10)
flavin-monooxygenase glucosinolate S-oxygenase 5 (FMO GS-OX5); FUNCTIONS IN: monooxygenase activity, 8-methylthiopropyl glucosinolate S-oxygenase activity, flavin-containing monooxygenase activity; INVOLVED IN: glucosinolate biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 3 (TAIR:AT1G62560.1); Has 12586 Blast hits to 12018 proteins in 1454 species: Archae - 35; Bacteria - 5986; Metazoa - 1231; Fungi - 1610; Plants - 812; Viruses - 0; Other Eukaryotes - 2912 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-474-MONOMERBioCyc:MetaCyc:AT1G12140-MONOMEREC:1.8.-.-eggNOG:COG2072
eggNOG:KOG1399EMBL:AC022522EMBL:BT030387EMBL:CP002684
EnsemblPlants:AT1G12140EnsemblPlants:AT1G12140.1entrez:837766Gene3D:3.50.50.60
GeneID:837766Genevisible:A8MRX0GO:GO:0004499GO:GO:0019761
GO:GO:0050660GO:GO:0050661GO:GO:0080107gramene_pathway:1.1.1.-
gramene_pathway:PWYQT-4474gramene_pathway:PWYQT-4475hmmpanther:PTHR23023hmmpanther:PTHR23023:SF94
HOGENOM:HOG000237857InParanoid:A8MRX0InterPro:IPR000960InterPro:IPR020946
InterPro:IPR023753KEGG:ath:AT1G12140OMA:SHEYRSPPaxDb:A8MRX0
Pfam:A8MRX0Pfam:PF00743PhylomeDB:A8MRX0PIR:D86256
PRIDE:A8MRX0PRINTS:PR00370PRO:PR:A8MRX0ProteinModelPortal:A8MRX0
Proteomes:UP000006548Reactome:R-ATH-217271RefSeq:NP_001077522.1RefSeq:NP_172678.3
SMR:A8MRX0STRING:3702.AT1G12140.1SUPFAM:SSF51905TAIR:AT1G12140
tair10-symbols:FMO GS-OX5UniGene:At.42090UniGene:At.42091UniProt:A8MRX0
Coordinates (TAIR10) chr1:+:4121386..4123366
Molecular Weight (calculated) 52106.50 Da
IEP (calculated) 6.13
GRAVY (calculated) -0.42
Length 459 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPARTRVNS LNVAVIGAGA AGLVAARELR RENHTVVVFE RDSKVGGLWV YTPNSEPDPL SLDPNRTIVH SSVYDSLRTN LPRECMGYRD FPFVPRPEDD
101: ESRDSRRYPS HREVLAYLED FAREFKLVEM VRFKTEVVLV EPEDKKWRVQ SKNSDGISKD EIFDAVVVCN GHYTEPRVAH VPGIDSWPGK QIHSHNYRVP
201: DQFKDQVVVV IGNFASGADI SRDITGVAKE VHIASRSNPS KTYSKLPGSN NLWLHSMIES VHEDGTIVFQ NGKVVQADTI VHCTGYKYHF PFLNTNGYIT
301: VEDNCVGPLY EHVFPPALAP GLSFIGLPWM TLQFFMFELQ SKWVAAALSG RVTLPSEEKM MEDVTAYYAK REAFGQPKRY THRLGGGQVD YLNWIAEQIG
401: APPGEQWRYQ EINGGYYRLA TQSDTFRDKW DDDHLIVEAY EDFLRQKLIS SLPSQLLES
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)