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AT1G11765.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant self-incompatibility protein S1 family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant self-incompatibility protein S1 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: Plant self-incompatibility protein S1 family (TAIR:AT3G26880.1); Has 176 Blast hits to 174 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JV9CeggNOG:ENOG4110646EMBL:AC007296EMBL:AK118567
EMBL:BT004726EMBL:CP002684EnsemblPlants:AT1G11765EnsemblPlants:AT1G11765.1
entrez:837721GeneID:837721Gramene:AT1G11765.1hmmpanther:PTHR31232
hmmpanther:PTHR31232:SF2HOGENOM:HOG000064548InterPro:IPR010264KEGG:ath:AT1G11765
OMA:NDVRERYPfam:PF05938PhylomeDB:Q9SAA0PIR:E86251
Proteomes:UP000006548RefSeq:NP_849642.1TAIR:AT1G11765TMHMM:TMhelix
UniGene:At.47043UniProt:Q9SAA0
Coordinates (TAIR10) chr1:+:3973908..3974321
Molecular Weight (calculated) 16188.40 Da
IEP (calculated) 9.65
GRAVY (calculated) -0.67
Length 137 amino acids
Sequence (TAIR10)
(BLAST)
001: MKNTSIFLVV FALCMISNAY GHSNPFKGKK TSLLFRNSLS HNKWLKVRCK SGDNDVRERY MKPGEDWGFS FHDDVMGETL FWCTMYKGAD YKVQKKFDAY
101: VQDKRMPHGG SYNYVAQEDG IYHSTLIHRM RKMYDWN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)