AT1G11460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.773 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nodulin MtN21 /EamA-like transporter family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G01070.1); Has 2512 Blast hits to 2503 proteins in 352 species: Archae - 22; Bacteria - 1127; Metazoa - 4; Fungi - 2; Plants - 1206; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:3857005..3859268 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36978.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.12 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.75 | ||||||||||||||||||||||||||||||||||||
| Length | 337 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGEDMRVVKV ESKWPPIIVM VISQVAMGSV NALVKKALDV GVNHMIIGAY RIAISSFILA PIAYILEREI IPEITFRLMV DHFISGLLGA SLMQFFYLLG 101: LSYTSATVAC ALVSLMPAIT FAFALILRTE KIKSLRTQAG MIKVMGTIIC ISGALFLTFY KGPHISNSHS HQEALPHNNN SDHNTKNWLL GCLYLTIGTV 201: LISLWILFQG TLSIKYPCKF SSTCLMSIFA AFQCALLSLY KSRDVKDWII DDRFVIGVIV YAGVIGQAMS TVSVTWGVKK LGAVFVSAIM PIALISASLF 301: DFIILHTPLY LGSLIGSVGT ITGLYVFLWG KNKDMEA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)