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AT1G11362.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G50325.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EMBL:DQ487481EnsemblPlants:AT1G11362EnsemblPlants:AT1G11362.1
entrez:6240451Gene3D:1.20.140.40GeneID:6240451GO:GO:0004857
Gramene:AT1G11362.1InterPro:IPR006501KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11
KEGG:ath:AT1G11362Pfam:PF04043PhylomeDB:Q1G3V3Proteomes:UP000006548
RefSeq:NP_001117269.1SMART:SM00856SMR:Q1G3V3SUPFAM:SSF101148
TAIR:AT1G11362TIGRfam:TIGR01614TIGRFAMs:TIGR01614TMHMM:TMhelix
UniGene:At.69155unipathway:UPA00545UniProt:Q1G3V3
Coordinates (TAIR10) chr1:-:3824630..3825184
Molecular Weight (calculated) 20601.80 Da
IEP (calculated) 5.68
GRAVY (calculated) 0.23
Length 184 amino acids
Sequence (TAIR10)
(BLAST)
001: MCLNVKSCFL FANIVFFLVF VVSASARFST EVTKSEINSI CTHTDVDASL CFEFLNSSPQ IAALDFYGLT KYLITYESRK FSDMLKQFQS LVNSTTDPSA
101: KGSYHVCVGT FDKGTGCFDD AFRHLASKDY ITLEWSVECT FDMAAGCEDE LSTFKPNPQL FKDISIVKNL SIMGLVIVKL FLKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)