AT1G10670.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATP-citrate lyase A-1 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
One of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase. Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ATP-citrate lyase A-1 (ACLA-1); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-2 (TAIR:AT1G60810.1). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:3535787..3538098 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49052.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.27 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 443 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MARKKIREYD SKRLVKEHFK RLSGKELPIR SVQADDVFWL HSCFGFSDIR HHVINETTDL NELVEKEPWL SSEKLVVKPD MLFGKRGKSG LVALKLDFAD 101: VATFVKERLG KEVEMSGCKG PITTFIVEPF VPHNEEYYLN VVSDRLGCSI SFSECGGIEI EENWDKVKTI FLPTGASLTP EICAPLVATL PLEIKAEIEE 201: FIKVIFTLFQ DLDFTFLEMN PFTLVDGSPY PLDMRGELDD TAAFKNFKKW GDIEFPLPFG RVMSPTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG 301: ASVIYADTVG DLGYASELGN YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN 401: YQKGLAKMRA LGDDIGVPIE VYGPEATMTG ICKEAIQYIT AAA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)