AT1G09260.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.520 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Chaperone DnaJ-domain superfamily protein | ||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G25560.1); Has 2956 Blast hits to 2955 proteins in 867 species: Archae - 40; Bacteria - 1338; Metazoa - 620; Fungi - 249; Plants - 426; Viruses - 3; Other Eukaryotes - 280 (source: NCBI BLink). | ||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:2993404..2993820 | ||||||||||||||||||||||||||||
Molecular Weight (calculated) | 16146.50 Da | ||||||||||||||||||||||||||||
IEP (calculated) | 10.29 | ||||||||||||||||||||||||||||
GRAVY (calculated) | -0.62 | ||||||||||||||||||||||||||||
Length | 138 amino acids | ||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MNDSMKAPKF FKNQLKLAEA HYQRGNLKGA IEIVNDLTFG HPNTSSNHHE ISQILLAYQI NLTSQKASFT HYDILRISNP FCSHQMIQRK YRDILVKLYP 101: DTNKSIAAKS AFEIINYAWK ILSDPEKRKD YNIKKRFK |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)