AT1G08650.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.979 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphoenolpyruvate carboxylase kinase 1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:2752206..2753150 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30814.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.37 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||
| Length | 276 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTCSQTLGNN NTNKYQICEE IGRGRFGTVS RVYAPATGDF FACKTIDKAS LSDDLDRACL DNEPKLMALL SYHPNIVQIH DLIDTDSTLS IFMELVHPSV 101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS 201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALSW FNDKVN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)