AT1G08220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 168 Blast hits to 168 proteins in 86 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:2581574..2583288 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 31059.50 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.10 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||
| Length | 274 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATTLNRILK HRSVSALNKH HQGLFSLTRY ENHDSLPSQM PALRSTTRSF LDFYKFGNKK AIEDERARLN DEMNRGYFAD MKEFKEHGGK IAAANKTIIP 101: AASAIKFPVL AVTFSNGKSL KLPIAPNSNE VDTESLVVPK VSLVCLSFRA SSQEMISSWS KPFLESFGNR KDLQLFEVSF IDKWLLGLAP IRKLLLRVLQ 201: KPNNNENSVL QRQVGYAFGD HYYFRKEIKV LNLLTGYILL LDKSGRIRWQ GFGTATPEEV SQLLSCTSLL LEDQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)