AT1G07650.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat transmembrane protein kinase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:2359817..2366423 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 113505.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.89 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1020 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MIYLHRIYFI IVLFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGE GTWIVTTYTT KGFESNITCD CSFLPQNSSC HVIRIGNLVG 0101: RALKSQNLTG IVPPEFSKLR HLKVLDLSRN SLTGSIPKEW ASMRLEDLSF MGNRLSGPFP KVLTRLTMLR NLSLEGNQFS GPIPPDIGQL VHLEKLHLPS 0201: NAFTGPLTEK LGLLKNLTDM RISDNNFTGP IPDFISNWTR ILKLQMHGCG LDGPIPSSIS SLTSLTDLRI SDLGGKPSSF PPLKNLESIK TLILRKCKII 0301: GPIPKYIGDL KKLKTLDLSF NLLSGEIPSS FENMKKADFI YLTGNKLTGG VPNYFVERNK NVDVSFNNFT DESSIPSHDC NRVTSNLVES FALGNKSHKG 0401: STCFLQRMPC VHPKRYHLYK LYINCGGGEV KVDKEITYQA DDEPKGASMY VLGANKRWAL SSTGNFMDND DDADEYTVQN TSRLSVNASS PSFGLYRTAR 0501: VSPLSLTYYG ICLGNGNYTV NLHFAEIIFT DDNTLYSLGK RLFDIYVQDQ LVIKNFNIQE AARGSGKPII KSFLVNVTDH TLKIGLRWAG KGTTGIPIRG 0601: VYGPMISAIS VEPNFKPPVY YDTKDIILKV GVPVAAATLL LFIIVGVFWK KRRDKNDIDK ELRGLDLQTG TFTLRQIKAA TDNFDVTRKI GEGGFGSVYK 0701: GELSEGKLIA VKQLSAKSRQ GNREFVNEIG MISALQHPNL VKLYGCCVEG NQLILVYEYL ENNCLSRALF GKDESSRLKL DWSTRKKIFL GIAKGLTFLH 0801: EESRIKIVHR DIKASNVLLD KDLNAKISDF GLAKLNDDGN THISTRIAGT IGYMAPEYAM RGYLTEKADV YSFGVVALEI VSGKSNTNFR PTEDFVYLLD 0901: WAYVLQERGS LLELVDPTLA SDYSEEEAML MLNVALMCTN ASPTLRPTMS QVVSLIEGKT AMQELLSDPS FSTVNPKLKA LRNHFWQNEL SRSLSFSTSG 1001: PRTASANSLV DAEEKTGLLD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)