AT1G07000.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : exocyst subunit exo70 family protein B2 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
exocyst subunit exo70 family protein B2 (EXO70B2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, plasma membrane, exocyst; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein B1 (TAIR:AT5G58430.1); Has 788 Blast hits to 778 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 10; Plants - 642; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:2150398..2152305 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 67718.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.83 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 599 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAEAGDENLY AAARDIARAL GKDPSAAGDI LQILSGYGAS GNRGGDPRPT PSRGGSNVNF DRALTSLERQ ISSYIVEDRP IWSDPVDSRT FLDSVDELLA 101: IAGDLRSMAG DKSVAVCQSR ADELIQQVMF RLQEEFGFVM DRAPDSFDSD DEFPGEEDND TSDGVIVARP ITDYKIVIEA LQSSVIGDLN AIAVRMVAGG 201: FAKECSRVYS SRRREFLEES LSRLHLRGLS MEEVQESPWQ DLEDEIDRWI KAVTLIFHVF FPSERLLCDR VFSDLPVSSV TDLSFMEVCR GTTTQLLNFA 301: DAIALGSRLP ERLFKVVDLY EAMQDLIPKM ETLFSDRYCS PLRHEALAIH KRLGEAIRGI FMELENLIRR DPPKTAFPGG GIHPITRYVM NYLRAACKSR 401: QSLEQILDQT GNETGSDTRP LSVQIIWVLE LLESNLEGKK RTYRDPSLCF LFMMNNDKYI LDKAKDNELG LVLGEDWIVK HAAKLRQYHS NYRRSSWNQV 501: VGLLRTDGPY PKLVENLRLF KSQFDEVCKV QSQWVVSDGQ LREELRSSVA GIVSPAYSNF IRRLKESPEI NGRRGEPFIP YTVEDVEFII KRLFKESSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)