AT1G06970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cation/hydrogen exchanger 14 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Putative Na+/H+ antiporter family | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cation/hydrogen exchanger 14 (CHX14); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: Cation/hydrogen exchanger family protein (TAIR:AT2G30240.1); Has 4532 Blast hits to 4506 proteins in 1259 species: Archae - 234; Bacteria - 3237; Metazoa - 0; Fungi - 116; Plants - 574; Viruses - 0; Other Eukaryotes - 371 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:2138109..2140818 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 92165.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.02 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.34 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 829 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSKLDLEEVN SMQRGKVHGP FLVENMVCQK NHMLTSKGVF LGSDPLKYAM PLMLLQMSVI IITSRLLYRL LKPLKQGMIS AQVLAGIILG PSLFGQSSAY 101: MQMFLPISGK ITLQTLSNLG FFIHLFLLGL RIDASIIRKA GSKAILIGTA SYALPFSLGN LTVLFLKNTY NLPPDVVHCI STVISLNAMT SFPVTTTVLA 201: ELNILNSDLG RLATNCSIVC EAFSWIVALV FRMFLRDGTL ASVWSFVWVT ALILVIFFVC RPAIIWLTER RSISIDKAGE IPFFPIIMVL LTISLTSEVL 301: GVHAAFGAFW LGVSLPDGPP LGTGLTTKLE MFATSLMLPC FISISGLQTN FFIIGESHVK IIEAVILITY GCKFLGTAAA SAYCNIQIGD AFSLALLMCC 401: QGVIEIYTCV MWKDEKVLNT ECFNLLIITL LLVTGISRFL VVCLYDPSKR YRSKSKRTIL DTRQRNLQFR LLLCVYNVEN VPSMVNLLEA SYPSRFSPIS 501: VFTLHLVELK GRAHAVLVPH HQMNKLDPNT VQSTHIVNGF QRFEQQNQGT LMAQHFTAAA PFSSINDDIC TLALDKKATL IVIPFHKQYA IDGTVDHVNP 601: SIRNINLNVL EKAPCSVGIF IDRGETEGRR SVLMSYTWRN VAVIFIEGRD DAEALAFSMR IAEHPEVSVT MIHFRHKSSL QQNHVVDVES ELAESYLIND 701: FKNFAMSKPK ISYREEIVRD GVETTQVISS LGDSFDLVVV GRDHDLESSV LYGLTDWSEC PELGVIGDMF ASSDFHFSVL VIHQQEGDSL AMDNSYKLPA 801: SPHRVGDPRV HPRFSVEEGF TSVDLHSNR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)