AT1G06770.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DREB2A-interacting protein 1 | ||||||||
| Curator Summary (TAIR10) |
Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. The DRIP1-GFP fusion protein is nuclear-localized. DRIP1 seems to be involved in regulating stress-related transcriptional changes and drought tolerance. | ||||||||
| Computational Description (TAIR10) |
DREB2A-interacting protein 1 (DRIP1); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 2 (TAIR:AT2G30580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:2079222..2080658 | ||||||||
| Molecular Weight (calculated) | 34455.60 Da | ||||||||
| IEP (calculated) | 10.43 | ||||||||
| GRAVY (calculated) | -1.03 | ||||||||
| Length | 307 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MVSAQAGTTR RRTKAPTRKE LRNGSLAERT VKKEESSGDE LLESTSSPDT LNKFTQNKRQ SKKSCKESIS NKENKDGDEP WDSKMDWKPL NFLVEVANGT 101: KPLKSSASQG SGSKSEHANV SRNQFQGSKT KTKNKKRKCK REDDKSNNGD PTTSETVTPK RMRTTQRKRS ATTLGDSRNL PQPDESSAKQ ERRNGPVWFS 201: LVASNDQEGG TSLPQIPANF LRIRDGNTTV SFIQKYLMRK LDLESENEIE IKCMGEAVIP TLTLYNLVDL WLQKSSNHQR FAALVGSSAK DFTMVLVYAR 301: KLPECNM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)