AT1G06250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G31100.1); Has 1168 Blast hits to 1158 proteins in 211 species: Archae - 0; Bacteria - 223; Metazoa - 26; Fungi - 117; Plants - 633; Viruses - 4; Other Eukaryotes - 165 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:1913339..1914850 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48125.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.33 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 423 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVEGIPKRWK VLSGQNKWKG LLDPLDPDLR RYIIHYGEMS QVGYDAFNWD RKSRYAGDCY YSKNRLLART GFLKANPFRY KVTKYIYATA SIKLPISFIV 101: KSLSKDASRV QTNWMGYIAV ATDQGKAMLG RRDIVVAWRG TLQPYEWAND FDFPLEPAIS VFPVTDPKDN PRIGSGWLDI YTASDSRSPY DTTSAQEQVQ 201: GELKRLLELY KDEEISITFT GHSLGAVMSV LSAADLVYGK KNNININLQK KQVPITVFAF GSPRIGDHNF KNVVDSLQPL NILRIVNVPD VAPHYPLLLY 301: SEIGEVLEIN TLNSTYLKRS LNFRNYHNLE IYLHGMAGMQ DTDGVFKLEI GRDISLVNKG LDALKDEYLV PSTWRCLANK GMLQMDDGTW KLDVHRRDHD 401: DDVDADDNDD SSTSNQLQEL NTD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)