AT1G06000.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.877 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 89B1 (TAIR:AT1G73880.1); Has 5632 Blast hits to 5556 proteins in 323 species: Archae - 0; Bacteria - 151; Metazoa - 482; Fungi - 23; Plants - 4909; Viruses - 43; Other Eukaryotes - 24 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:1820495..1821802 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48124.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.12 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.03 | ||||||||||||||||||||||||||||||||
| Length | 435 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTTTTTKKPH VLVIPFPQSG HMVPHLDLTH QILLRGATVT VLVTPKNSSY LDALRSLHSP EHFKTLILPF PSHPCIPSGV ESLQQLPLEA IVHMFDALSR 101: LHDPLVDFLS RQPPSDLPDA ILGSSFLSPW INKVADAFSI KSISFLPINA HSISVMWAQE DRSFFNDLET ATTESYGLVI NSFYDLEPEF VETVKTRFLN 201: HHRIWTVGPL LPFKAGVDRG GQSSIPPAKV SAWLDSCPED NSVVYVGFGS QIRLTAEQTA ALAAALEKSS VRFIWAVRDA AKKVNSSDNS VEEDVIPAGF 301: EERVKEKGLV IRGWAPQTMI LEHRAVGSYL THLGWGSVLE GMVGGVMLLA WPMQADHFFN TTLIVDKLRA AVRVGENRDS VPDSDKLARI LAESAREDLP 401: ERVTLMKLRE KAMEAIKEGG SSYKNLDELV AEMCL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)