AT1G05570.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.556 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : callose synthase 1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
callose synthase 1 (CALS1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:1647880..1658677 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 221040.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.23 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||
| Length | 1909 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MAQRREPDPP PPQRRILRTQ TVGSLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET 0101: TLAGRQKSDA REMQSFYQHY YKKYIQALLN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL ETHNKVEEKT QIYVPYNILP LDPDSQNQAI 0201: MRLPEIQAAV AALRNTRGLP WTAGHKKKLD EDILDWLQSM FGFQKDNVLN QREHLILLLA NVHIRQFPKP DQQPKLDDRA LTIVMKKLFR NYKKWCKYLG 0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFMPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYQ TISKEAKRSR 0401: GGKSKHSVWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLERS EIKSNSGDRW MGKVNFVEIR SFWHIFRSFD RLWSFYILCL QAMIVIAWNG 0501: SGELSAIFQG DVFLKVLSVF ITAAILKLAQ AVLDIALSWK ARHSMSLYVK LRYVMKVGAA AVWVVVMAVT YAYSWKNASG FSQTIKNWSD YKIMMLMMWW 0601: SQPRLYIGRG MHESALSLFK YTMFWIVLLI SKLAFSYYAE IKPLVGPTKD IMRIHISVYS WHEFFPHAKN NLGVVIALWS PVILVYFMDT QIWYAIVSTL 0701: VGGLNGAFRR LGEIRTLGML RSRFQSIPGA FNDCLVPQDN SDDTKKKRFR ATFSRKFDQL PSSKDKEAAR FAQMWNKIIS SFREEDLISD REMELLLVPY 0801: WSDPDLDLIR WPPFLLASKI PIALDMAKDS NGKDRELKKR LAVDSYMTCA VRECYASFKN LINYLVVGER EGQVINDIFS KIDEHIEKET LITELNLSAL 0901: PDLYGQFVRL IEYLLENREE DKDQIVIVLL NMLELVTRDI MEEEVPSLLE TAHNGSYVKY DVMTPLHQQR KYFSQLRFPV YSQTEAWKEK IKRLHLLLTV 1001: KESAMDVPSN LEARRRLTFF SNSLFMDMPP APKIRNMLSF SVLTPYFSED VLFSIFGLEQ QNEDGVSILF YLQKIFPDEW TNFLERVKCG NEEELRARED 1101: LEEELRLWAS YRGQTLTKTV RGMMYYRKAL ELQAFLDMAK DEELLKGYKA LELTSEEASK SGGSLWAQCQ ALADMKFTFV VSCQQYSIHK RSGDQRAKDI 1201: LRLMTTYPSI RVAYIDEVEQ THKESYKGTE EKIYYSALVK AAPQTKPMDS SESVQTLDQL IYRIKLPGPA ILGEGKPENQ NHAIIFTRGE GLQTIDMNQD 1301: NYMEEAFKMR NLLQEFLEKH GGVRCPTILG LREHIFTGSV SSLAWFMSNQ ENSFVTIGQR VLASPLKVRF HYGHPDIFDR LFHLTRGGIC KASKVINLSE 1401: DIFAGFNSTL REGNVTHHEY IQVGKGRDVG LNQISMFEAK IANGNGEQTL SRDLYRLGHR FDFFRMLSCY FTTIGFYFST MLTVLTVYVF LYGRLYLVLS 1501: GLEEGLSSQR AFRNNKPLEA ALASQSFVQI GFLMALPMMM EIGLERGFHN ALIEFVLMQL QLASVFFTFQ LGTKTHYYGR TLFHGGAEYR GTGRGFVVFH 1601: AKFAENYRFY SRSHFVKGIE LMILLLVYQI FGQSYRGVVT YILITVSIWF MVVTWLFAPF LFNPSGFEWQ KIVDDWTDWN KWIYNRGGIG VPPEKSWESW 1701: WEKELEHLRH SGVRGITLEI FLALRFFIFQ YGLVYHLSTF KGKNQSFWVY GASWFVILFI LLIVKGLGVG RRRFSTNFQL LFRIIKGLVF LTFVAILITF 1801: LALPLITIKD LFICMLAFMP TGWGMLLIAQ ACKPLIQQLG IWSSVRTLAR GYEIVMGLLL FTPVAFLAWF PFVSEFQTRM LFNQAFSRGL QISRILGGQR 1901: KDRSSKNKE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)