suba logo
AT1G05205.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 44 Blast hits to 44 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J0B5eggNOG:ENOG410ZUG8EMBL:AY084452EMBL:BT024538
EMBL:CP002684EnsemblPlants:AT1G05205EnsemblPlants:AT1G05205.1entrez:839266
GeneID:839266Gramene:AT1G05205.1hmmpanther:PTHR36706hmmpanther:PTHR36706:SF1
HOGENOM:HOG000272737KEGG:ath:AT1G05205OMA:FWRCMRSPhylomeDB:Q8LG56
Proteomes:UP000006548RefSeq:NP_563730.1STRING:3702.AT1G05205.1TAIR:AT1G05205
UniGene:At.10412UniGene:At.66937UniProt:Q8LG56
Coordinates (TAIR10) chr1:-:1509352..1510249
Molecular Weight (calculated) 10676.80 Da
IEP (calculated) 7.42
GRAVY (calculated) -1.08
Length 91 amino acids
Sequence (TAIR10)
(BLAST)
1: MSETRPVPRR ESPWGLPEGH REPKAHRCND RVEDVIQALF EGNPFKTVPG PFKLFYRCMR SKPGEEPTEP FKYLDLEPPK REVKLEEAKL E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)