AT1G04280.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cell killing; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Zeta toxin (InterPro:IPR010488); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06750.2); Has 195 Blast hits to 194 proteins in 47 species: Archae - 0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 3; Other Eukaryotes - 20 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:1143643..1146541 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59980.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.45 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||
| Length | 534 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVKPLGEGTR DVSNVGCKSV DLLLASLGGL AAAVAAAYAG ELLLRRRKLD QGASMGYKDV KIAPLIERKD SGRRSNLERF SHYVARQLGF EDPNEYPQLC 101: KLANGYLLKT KGYDENVDEY LENEAERDSL YVHLLEEFDR CILTYFSFNW TQSSNLISQA LSDESDQKVP KLKDFVMAAT RKQRFERVTK DLKVKRVIST 201: LVEEMRVIGS GSSEPHCTEV MSPVAHNKRS PVLLLMGGGM GAGKSTVLKD IFLESFWSEA QADAVVIEAD AFKETDVIYR ALSSRGHHDD MLQTAELVHQ 301: SSTDAASSLL VTALNDGRDV IMDGTLSWEP FVEQMIEMAR NVHKQKYRMG EGYKVSEEGT ITEKYWEEEE EETKENGKQQ NLKPYRIELV GVVCDAYLAV 401: ARGIRRALMV KRAVRVKPQL NSHKRFANAF PKYCELVDNA RLYCTNAVGG PPRLIAWKDG NSKLLVDPED IDCLKRVSSL NPDAESIYEL YPDPSQLSKP 501: GSVWNDVVLV PSRPKVQKEL SDAIRRIEKA QPKN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)