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AT1G03320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 1038 Blast hits to 683 proteins in 112 species: Archae - 4; Bacteria - 14; Metazoa - 318; Fungi - 117; Plants - 86; Viruses - 8; Other Eukaryotes - 491 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JXNCeggNOG:ENOG41103U5EMBL:AC005278EMBL:CP002684
EnsemblPlants:AT1G03320EnsemblPlants:AT1G03320.1entrez:839528GeneID:839528
Gramene:AT1G03320.1HOGENOM:HOG000154048KEGG:ath:AT1G03320OMA:RSHYPPF
PIR:G86164Proteomes:UP000006548RefSeq:NP_171831.1TAIR:AT1G03320
UniGene:At.51468UniProt:Q9ZVT3
Coordinates (TAIR10) chr1:+:817027..817767
Molecular Weight (calculated) 24685.90 Da
IEP (calculated) 9.32
GRAVY (calculated) -1.28
Length 220 amino acids
Sequence (TAIR10)
(BLAST)
001: MNDGCCSKCQ VKATKKKKSK KNEDEPDEED VKQKQKVSKN ENPKKDSNGE KGSDEKDKKN KNVLRWPQDS STKKEKGDGK NLSSEENGGK NLPSEKNGVN
101: PPPPCYTAQP MMYHGGHNPL HRWPISAASR SHYPPFSMGA MHGPYGGCGP CGGPIDPYQS MPRPRMFDGV HISQYPPMAA AYPYMAAAGP FPYWQTRPYM
201: DANPMKRYTT YAENYSYFYS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)