AT1G03120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.966 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : responsive to abscisic acid 28 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Atrab28 plays a role in the ion cell balance during late embryogenesis and germination. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
responsive to abscisic acid 28 (RAB28); CONTAINS InterPro DOMAIN/s: Seed maturation protein (InterPro:IPR007011); BEST Arabidopsis thaliana protein match is: Seed maturation protein (TAIR:AT3G22490.1); Has 159 Blast hits to 126 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:752271..753140 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 18942.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.34 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.56 | ||||||||||||||||||||||||||||||||
| Length | 182 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAQHQHSPQR PRDQDNTRPH DQYGIVFSVS GDDVARKQGD SFSQPDPTVA TMGSVDTVTI GEALEATALS LGDKPVDRRD AAAIQAAETR ATGESKGRPG 101: GLAVAAQAAA TTNEQTVSEE DKVNIADILT DAAERLPGDK VVTSEDAEAV VGAELRSSSE MKTTPGGVAD SMSAGARLNQ QL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)