AT1G01770.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.619 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:278759..282490 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 69004.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.96 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||
| Length | 632 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANPDVKEIL CDCVINLREN PKRRRETVYV GCGAGFGGDR PLAALKLLQR VEELNYLVLE CLAERTLADR WLSMASGGLG YDPRVSEWMQ LLLPLAVERG 101: TCIITNMGAI DPSGAQKKVL EVAGELGLTI SVAVAHEVHF ETGSGSSFGG QYCSAGGTST YLGAAPIVEC LEKYQPNVII TSRVADAALF LAPMVYELGW 201: NWNDLELLAQ GTLAGHLLEC GCQLTGGYFM HPGDQYRDMA FPLLQDLSLP YAEIGYDGKV CVSKVEGSGG ILNTSTCAEQ LLYEIADPSA YITPDVVIDI 301: RGVSFLPLSD CKVQCSGAKP SSNTSVPEKL LRLIPKECGW KGWGEISYGG NGSIQRAKAS EFLVRSWMEE TIPGVNHCIL SYVIGVDSLK ATSNGTESWQ 401: SCGDIRLRMD GLFKLKEHAV QLTKEFTALY TNGPAGGGGI STGHKMEIVL EKRLVSRESV MWKTGLQHTN TSEPETSEHH SPEKMPKLPK ENPKNLTMRG 501: YQSGFHHSPA PSGQKIPLYS VAHSRAGDKG NDINFSIIPH YSPDVERLKL IITPQWVKHV MSVLLSTSSF LELDAKPMDE NVSVEIYDVE GIHAMNVVVR 601: NILDGGVNCS RRIDRHGKTI SDLILCQQVV LI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)