AT1G01740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase protein with tetratricopeptide repeat domain | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BR-signaling kinase 3 (TAIR:AT4G00710.1); Has 33834 Blast hits to 33303 proteins in 1392 species: Archae - 10; Bacteria - 2383; Metazoa - 7709; Fungi - 204; Plants - 21978; Viruses - 102; Other Eukaryotes - 1448 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:272111..274239 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54041.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.38 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||
| Length | 483 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGQSSKIGT CCSHKTTALE APDVENKENG EVNGVHSFRE YSLEQLKIAT SCFALENVVS EHGETAPNVV YQGKLENHMK IAIKRFSGTA WPDPRQFLEE 101: ARLVGQLRSK RMANLLGYCC EGGERLLVAE FMPNETLAKH LFHWDTEPMK WAMRLRVALY ISEALEYCSN NGHTLYHDLN AYRVLFDEEC NPRLSTFGLM 201: KNSRDGKSYS TNLAFTPPEY LRTGRITAES VIYSFGTLLL DLLTGKHIPP SHALDLIRDR NLQTLTDSCL EGQFSDSDGT ELVRLTSCCL QYEARERPNI 301: KSLVTALISL QKDTEVLSHV LMGLPQSGTF ASPPSPFAEA CSGKDLTSMV EILEKIGYKD DEDLSFMWTE QMQEAINSKK KGDIAFRRKD FSEAIEFYTQ 401: FLDLGMISAT VLVRRSQSYL MSNMAKEALD DAMKAQGISP VWYVALYLQS AALSVLGMEK ESQIALTEGS ILEARKISAS TQN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)