AT1G01480.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.988 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : 1-amino-cyclopropane-1-carboxylate synthase 2 | ||||||||||||
| Curator Summary (TAIR10) |
a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library. | ||||||||||||
| Computational Description (TAIR10) |
1-amino-cyclopropane-1-carboxylate synthase 2 (ACS2); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 28365 Blast hits to 28364 proteins in 2923 species: Archae - 821; Bacteria - 19365; Metazoa - 634; Fungi - 793; Plants - 1286; Viruses - 0; Other Eukaryotes - 5466 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:176607..178051 | ||||||||||||
| Molecular Weight (calculated) | 43539.40 Da | ||||||||||||
| IEP (calculated) | 8.13 | ||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||
| Length | 390 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKARGGRVT FDPERVVMSG GATGANETIM FCLADPGDVF LIPSPYYAAF DRDLRWRTGV EIIPVPCSSS DNFKLTVDAA EWAYKKAQES NKKVKGLILT 101: NPSNPLGTML DKDTLTNLVR FVTRKNIHLV VDEIYAATVF AGGDFVSVAE VVNDVDISEV NVDLIHIVYS LSKDMGLPGF RVGIVYSFND SVVSCARKMS 201: SFGLVSSQTQ LMLASMLSDD QFVDNFLMES SRRLGIRHKV FTTGIKKADI ACLTSNAGLF AWMDLRHLLR DRNSFESEIE LWHIIIDRVK LNVSPGSSFR 301: CTEPGWFRIC FANMDDDTLH VALGRIQDFV SKNKNKIVEK ASENDQVIQN KSAKKLKWTQ TNLRLSFRRL YEDGLSSPGI MSPHSPLLRA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)