AT1G01450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.932 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT1G64300.2); Has 73829 Blast hits to 73194 proteins in 2427 species: Archae - 72; Bacteria - 7086; Metazoa - 29204; Fungi - 5761; Plants - 19826; Viruses - 200; Other Eukaryotes - 11680 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:164105..165517 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53120.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.87 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||||||
| Length | 470 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADFLLKHLG DGNESPKLFP SSLLDNTKDY QVKKRLGNGS QYKEITWLGE SFALRHFFGD IDALLPQITP LLSLSHPNIV YYLCGFTDEE KKECFLVMEL 101: MRKTLGMHIK EVCGPRKKNT LSLPVAVDLM LQIALGMEYL HSKRIYHGEL NPSNILVKPR SNQSGDGYLL GKIFGFGLNS VKGFSSKSAS LTSQNENFPF 201: IWYSPEVLEE QEQSGTAGSL KYSDKSDVYS FGMVSFELLT GKVPFEDSHL QGDKMSRNIR AGERPLFPFN SPKFITNLTK RCWHADPNQR PTFSSISRIL 301: RYIKRFLALN PECYSSSQQD PSIAPTVDYC EIETKLLQKL SWESTELTKV SQVPFQMFAY RVVERAKTCE KDNLREPSES GSEWASCSED EGGAGSDEQL 401: SYAKERRLSC SSNDVGMSKK QVSNLLKRAS SLKPIQKPGE IIISQYIYIY IGSLTNMNLV TCTNFFVLCH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)